STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_0044KEGG: aau:AAur_1909 putative surface protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Cna B domain protein; Gram-positive anchor. (507 aa)    
Predicted Functional Partners:
Cfla_0043
Sortase family protein; KEGG: cdi:DIP2225 putative fimbrial associated sortase-like protein; TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B.
 
   
 0.898
Cfla_0045
TIGRFAM: LPXTG-motif cell wall anchor domain protein; conserved repeat domain protein; KEGG: Muc19; mucin 19.
 
     0.887
Cfla_1980
TIGRFAM: pyruvate kinase; KEGG: bcv:Bcav_2215 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
   
    0.525
Cfla_0948
TIGRFAM: YD repeat protein; PFAM: PA14 domain protein; YD repeat-containing protein; KEGG: cmi:CMM_0627 hypothetical protein; SMART: PA14 domain protein.
 
     0.404
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.