STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_0807KEGG: jde:Jden_1148 hypothetical protein. (229 aa)    
Predicted Functional Partners:
Cfla_0808
KEGG: jde:Jden_1638 hypothetical protein.
 
     0.863
Cfla_0167
KEGG: hypothetical protein.
  
     0.702
Cfla_1615
KEGG: hypothetical protein.
  
     0.669
Cfla_3089
KEGG: hypothetical protein.
  
     0.619
Cfla_0146
KEGG: hypothetical protein.
  
     0.561
Cfla_3307
KEGG: kra:Krad_3219 hypothetical protein.
 
     0.519
Cfla_3319
KEGG: jde:Jden_1619 hypothetical protein.
 
     0.486
Cfla_0017
KEGG: hypothetical protein.
  
     0.468
Cfla_0839
KEGG: bcv:Bcav_0907 hypothetical protein.
  
     0.451
Cfla_0688
PFAM: glycoside hydrolase 15-related; KEGG: bcv:Bcav_0817 glycoside hydrolase 15-related protein.
  
     0.440
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.