STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_1440KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (596 aa)    
Predicted Functional Partners:
Cfla_3160
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
    
0.878
Cfla_1441
KEGG: bcv:Bcav_1666 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
    
0.835
Cfla_1443
KEGG: sgr:SGR_5731 putative NadR-like transcriptional regulator.
  
    0.726
Cfla_1446
KEGG: lbf:LBF_2617 hypothetical protein.
  
    0.719
Cfla_1442
KEGG: sgr:SGR_5730 putative membrane transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC.
       0.718
Cfla_1444
PFAM: ATPase associated with various cellular activities AAA_3; KEGG: lbf:LBF_2615 MoxR-like ATPase.
       0.718
Cfla_1445
Hypothetical protein; KEGG: swi:Swit_0604 sporulation domain-containing protein.
       0.718
Cfla_1447
KEGG: lbf:LBF_2618 hypothetical protein.
       0.718
Cfla_1448
PFAM: AMP-dependent synthetase and ligase; KEGG: lbf:LBF_2619 phenylacetate--CoA ligase.
       0.718
Cfla_1439
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR.
 
     0.602
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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