STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_1615KEGG: hypothetical protein. (157 aa)    
Predicted Functional Partners:
hisB
KEGG: imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase.
       0.836
hisC
KEGG: histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.835
Cfla_0146
KEGG: hypothetical protein.
  
     0.761
Cfla_0167
KEGG: hypothetical protein.
  
     0.757
Cfla_2238
PFAM: metallophosphoesterase; KEGG: metallophosphoesterase.
  
     0.757
Cfla_1506
KEGG: hypothetical protein.
  
     0.752
Cfla_0122
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: anti-sigma-factor antagonist.
  
     0.728
Cfla_3089
KEGG: hypothetical protein.
  
     0.705
Cfla_3307
KEGG: kra:Krad_3219 hypothetical protein.
  
     0.697
Cfla_1091
KEGG: bcv:Bcav_1332 hypothetical protein.
  
     0.685
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.