STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_1663PFAM: virulence factor MVIN family protein; KEGG: bcv:Bcav_2351 virulence factor MviN family protein. (541 aa)    
Predicted Functional Partners:
Cfla_1662
KEGG: hypothetical protein.
 
   
 0.956
Cfla_1661
KEGG: bcv:Bcav_2353 hypothetical protein.
 
   
 0.950
Cfla_1660
PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: bcv:Bcav_2354 thiamin pyrophosphokinase catalytic region.
 
     0.889
Cfla_1865
KEGG: bcv:Bcav_2056 protein of unknown function DUF952.
  
     0.733
Cfla_1657
TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bcv:Bcav_2357 hemolysin A; SMART: RNA-binding S4 domain protein.
     
 0.700
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
   
   0.682
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.678
Cfla_1659
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.678
Cfla_3189
PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family 2.
 
   
 0.656
Cfla_1656
KEGG: Hypothetical protein CBG10720.
       0.570
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.