STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_2121KEGG: aau:AAur_1729 hypothetical protein. (55 aa)    
Predicted Functional Partners:
map-2
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.681
Cfla_2123
PFAM: ROK family protein; KEGG: kra:Krad_3319 ROK family protein.
       0.681
Cfla_1460
KEGG: hypothetical protein.
  
     0.634
Cfla_0687
KEGG: bcv:Bcav_0815 hypothetical protein.
  
     0.561
Cfla_2124
KEGG: hypothetical protein.
       0.558
Cfla_1615
KEGG: hypothetical protein.
  
     0.543
Cfla_1490
TIGRFAM: DivIVA domain repeat protein; DivIVA domain; KEGG: hypothetical protein.
  
     0.513
Cfla_0679
PFAM: DSBA oxidoreductase; KEGG: bcv:Bcav_0799 DsbA oxidoreductase.
  
     0.489
Cfla_2068
KEGG: hypothetical protein.
  
     0.486
Cfla_1216
KEGG: acyl-CoA thioesterase I precursor.
  
     0.461
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.