STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_2794Guanine deaminase; KEGG: kra:Krad_2072 CMP/dCMP deaminase zinc-binding; PFAM: CMP/dCMP deaminase zinc-binding. (186 aa)    
Predicted Functional Partners:
Cfla_1031
Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.906
Cfla_0626
TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.903
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
 
  0.903
Cfla_2871
PFAM: phosphoribosyltransferase; KEGG: stp:Strop_0086 phosphoribosyltransferase.
  
 
  0.903
Cfla_1697
KEGG: bcv:Bcav_1932 thymidine kinase; PFAM: thymidine kinase.
 
  
 0.598
Cfla_2793
PFAM: protein of unknown function DUF182; KEGG: cmi:CMM_1914 hypothetical protein.
       0.580
Cfla_1027
TIGRFAM: adenosine deaminase; KEGG: bcv:Bcav_2936 adenosine deaminase; PFAM: adenosine/AMP deaminase.
     
 0.555
hisE
KEGG: aau:AAur_1830 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase.
   
    0.544
Cfla_2799
KEGG: nca:Noca_3976 hypothetical protein.
 
     0.508
Cfla_0431
KEGG: aau:AAur_3502 uridine kinase.
   
 
  0.506
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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