STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_2839PFAM: Protein of unknown function, PGPGW, transmembrane; KEGG: hypothetical protein. (107 aa)    
Predicted Functional Partners:
Cfla_2838
KEGG: bfa:Bfae_01790 hypothetical protein.
       0.559
Cfla_2256
Putative FHA domain containing protein; KEGG: sgr:SGR_2057 hypothetical protein.
  
     0.451
Cfla_2272
KEGG: nml:Namu_1911 transcriptional regulator domain protein; PFAM: transcriptional regulator domain protein; transcriptional activator domain; SMART: transcriptional regulator domain protein.
  
     0.431
Cfla_2271
KEGG: sgr:SGR_2078 hypothetical protein.
 
     0.419
Cfla_1781
PFAM: sporulation and cell division protein SsgA; KEGG: sgr:SGR_5997 putative SsgB protein.
 
     0.415
Cfla_2837
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
       0.412
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.