STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_2962PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_0656 major facilitator transporter. (461 aa)    
Predicted Functional Partners:
Cfla_2961
Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: sma:SAV_5143 transcription regulator ArsR.
 
     0.725
Cfla_1376
KEGG: bcv:Bcav_2624 GCN5-related protein N- acetyltransferase.
  
    0.513
Cfla_0986
PFAM: extracellular solute-binding protein family 5; KEGG: cmi:CMM_2185 putative peptide ABC transporter, substrate-binding protein.
 
     0.428
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.