STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_3122KEGG: hypothetical protein. (373 aa)    
Predicted Functional Partners:
Cfla_3121
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   0.967
Cfla_2198
KEGG: jde:Jden_0459 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.
  
     0.508
Cfla_1631
PFAM: 5'-Nucleotidase domain protein; Endonuclease/exonuclease/phosphatase; metallophosphoesterase; KEGG: bcv:Bcav_0364 5'-nucleotidase domain protein.
  
    0.468
Cfla_3120
KEGG: cai:Caci_4288 cellulose-binding family II; PFAM: cellulose-binding family II; SMART: cellulose-binding family II.
       0.463
Cfla_3409
KEGG: kra:Krad_4292 hypothetical protein.
  
     0.461
Cfla_2195
KEGG: bcv:Bcav_1762 transglutaminase domain protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein.
  
     0.443
Cfla_3102
KEGG: hypothetical protein.
 
    0.429
Cfla_2196
PFAM: protein of unknown function DUF58; KEGG: nml:Namu_1332 protein of unknown function DUF58.
 
     0.420
Cfla_1212
KEGG: aau:AAur_2638 hypothetical protein.
 
    0.407
Cfla_0144
KEGG: saq:Sare_3387 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
   0.402
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.