STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_3160ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. (332 aa)    
Predicted Functional Partners:
Cfla_3161
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsa:RSal33209_1230 ABC transporter permease protein.
 
 0.999
Cfla_3162
PFAM: NLPA lipoprotein; KEGG: rsa:RSal33209_1229 ABC transporter substrate- binding protein; Belongs to the nlpA lipoprotein family.
 
 0.999
Cfla_1440
KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
    
0.878
Cfla_2287
TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: jde:Jden_1656 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SMART: AAA ATPase.
    
0.868
Cfla_2288
TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: bcv:Bcav_1614 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; SMART: AAA ATPase.
 
    
0.838
Cfla_2050
KEGG: bcv:Bcav_2312 ABC transporter transmembrane region; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
     
0.820
Cfla_0106
KEGG: methylenetetrahydrofolate reductase (NAD(P)H); PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.652
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.603
Cfla_2236
KEGG: gbr:Gbro_2160 iron dependent repressor; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; regulatory protein Crp.
   
   0.468
Cfla_0772
KEGG: bcv:Bcav_0882 iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor.
    
   0.451
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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