STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_3168Cellulose-binding family II; KEGG: ach:Achl_2956 beta-mannanase-like protein; PFAM: cellulose-binding family II; SMART: cellulose-binding family II; Belongs to the glycosyl hydrolase 26 family. (490 aa)    
Predicted Functional Partners:
Cfla_3169
KEGG: ami:Amir_3495 cellulose-binding family II; PFAM: cellulose-binding family II; lipolytic protein G-D-S-L family; SMART: cellulose-binding family II.
 
    
0.535
Cfla_3368
PFAM: NERD domain protein; KEGG: fal:FRAAL5342 putative DNA helicase II-like protein.
  
     0.510
Cfla_3154
PFAM: glycosyl transferase family 2; KEGG: cellulose synthase (UDP-forming).
     0.498
Cfla_0809
Glycoside hydrolase family 10; KEGG: cpy:Cphy_2108 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
     0.494
Cfla_3167
KEGG: transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI.
       0.493
Cfla_0383
KEGG: ami:Amir_3108 ricin B lectin; PFAM: Ricin B lectin; lipolytic protein G-D-S-L family; SMART: Ricin B lectin.
  
     0.491
Cfla_0334
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
     0.429
Cfla_0091
PFAM: putative esterase; KEGG: cpi:Cpin_4242 putative esterase.
  
     0.402
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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