STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_3214KEGG: cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator. (443 aa)    
Predicted Functional Partners:
Cfla_3213
PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: FAD-binding 9 siderophore-interacting domain protein.
       0.620
Cfla_2384
KEGG: bcv:Bcav_1165 cell envelope-related protein transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
 
   
0.583
Cfla_3215
KEGG: mva:Mvan_5448 luciferase family protein; TIGRFAM: F420-dependent oxidoreductase, G6PDH family; PFAM: Luciferase-like, subgroup.
       0.533
Cfla_0031
KEGG: FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
  
     0.510
Cfla_1064
PFAM: Glycosyl transferase, family 4, conserved region; KEGG: bcv:Bcav_1290 glycosyl transferase family 4.
 
  
 0.436
Cfla_3216
PFAM: protein of unknown function DUF125 transmembrane; KEGG: protein of unknown function DUF125 transmembrane.
       0.433
Cfla_3454
PFAM: conserved hypothetical protein; KEGG: hypothetical protein.
  
   
 0.429
Cfla_0852
PFAM: G5 domain protein; protein of unknown function DUF348; KEGG: G5 domain protein.
  
     0.422
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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