STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfla_3363PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ace:Acel_1362 binding-protein-dependent transport systems inner membrane component. (274 aa)    
Predicted Functional Partners:
Cfla_3364
KEGG: ace:Acel_1361 binding-protein-dependent transport systems inner membrane component.
  0.994
Cfla_3365
PFAM: extracellular solute-binding protein family 1; KEGG: ace:Acel_1360 extracellular solute-binding protein.
 
 0.990
Cfla_0674
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.977
Cfla_3051
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cmi:CMM_0297 putative sugar ABC transporter, permease component.
 0.976
Cfla_0963
KEGG: bcv:Bcav_1098 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.974
Cfla_1127
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_2718 binding-protein-dependent transport systems inner membrane component.
 0.974
Cfla_3050
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cmi:CMM_0298 putative sugar ABC transporter, permease component.
  
  
 
0.922
Cfla_1128
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_2717 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.921
Cfla_3054
PFAM: extracellular solute-binding protein family 1; KEGG: cms:CMS_0868 putative solute-binding transport protein.
 
 0.910
Cfla_1126
PFAM: extracellular solute-binding protein family 1; KEGG: jde:Jden_2072 extracellular solute-binding protein family 1.
 
 0.907
Your Current Organism:
Cellulomonas flavigena
NCBI taxonomy Id: 446466
Other names: C. flavigena DSM 20109, Cellulomonas flavigena DSM 20109, Cellulomonas flavigena str. DSM 20109, Cellulomonas flavigena strain DSM 20109
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