node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ndas_0572 | Ndas_0732 | Ndas_0572 | Ndas_0732 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087:IPR013831:IPR013830; KEGG: tfu:Tfu_0855 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: C1YNC7 Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase. | 0.530 |
Ndas_0572 | Ndas_3166 | Ndas_0572 | Ndas_3166 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583:IPR006982:IPR002932:IPR002489:IPR 013785:IPR001202:IPR017932; KEGG: tfu:Tfu_1173 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: C1YUQ7 Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II. | 0.604 |
Ndas_0572 | Ndas_3660 | Ndas_0572 | Ndas_3660 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | DNA-(apurinic or apyrimidinic site) lyase; COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR010979:IPR012319:IPR015886:IPR015887:IPR 000214; KEGG: tfu:Tfu_0694 putative DNA repair hydrolase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: C1YR34 DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; Belongs to the FPG family. | 0.602 |
Ndas_0572 | glyQS | Ndas_0572 | Ndas_0740 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.561 |
Ndas_0572 | guaA | Ndas_0572 | Ndas_4006 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | 0.540 |
Ndas_0572 | msrA | Ndas_0572 | Ndas_5071 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.606 |
Ndas_0572 | mutM | Ndas_0572 | Ndas_0213 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.602 |
Ndas_0572 | pheT | Ndas_0572 | Ndas_3065 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR005121:IPR005146:IPR002547:IPR005147:IPR 004532:IPR020825:IPR012340:IPR016027:IPR009061; KEGG: tfu:Tfu_2060 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/4 domain protein; tRNA synthetase B5; t-RNA-binding domain protein; ferredoxin-fold anticodon-binding; PRIAM: Phenylalanine--tRNA ligase; SMART: B3/4 domain protein; ferredoxin-fold anticodon-binding; tRNA synthetase B5; SPTR: C1YVE0 Phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B [...] | 0.560 |
Ndas_0572 | polA | Ndas_0572 | Ndas_0959 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.958 |
Ndas_0572 | sbcD | Ndas_0572 | Ndas_0628 | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.669 |
Ndas_0732 | Ndas_0572 | Ndas_0732 | Ndas_0572 | Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087:IPR013831:IPR013830; KEGG: tfu:Tfu_0855 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: C1YNC7 Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase. | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | 0.530 |
Ndas_3166 | Ndas_0572 | Ndas_3166 | Ndas_0572 | COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583:IPR006982:IPR002932:IPR002489:IPR 013785:IPR001202:IPR017932; KEGG: tfu:Tfu_1173 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: C1YUQ7 Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II. | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | 0.604 |
Ndas_3166 | guaA | Ndas_3166 | Ndas_4006 | COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583:IPR006982:IPR002932:IPR002489:IPR 013785:IPR001202:IPR017932; KEGG: tfu:Tfu_1173 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: C1YUQ7 Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II. | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | 0.885 |
Ndas_3166 | pheT | Ndas_3166 | Ndas_3065 | COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583:IPR006982:IPR002932:IPR002489:IPR 013785:IPR001202:IPR017932; KEGG: tfu:Tfu_1173 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: C1YUQ7 Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II. | COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR005121:IPR005146:IPR002547:IPR005147:IPR 004532:IPR020825:IPR012340:IPR016027:IPR009061; KEGG: tfu:Tfu_2060 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/4 domain protein; tRNA synthetase B5; t-RNA-binding domain protein; ferredoxin-fold anticodon-binding; PRIAM: Phenylalanine--tRNA ligase; SMART: B3/4 domain protein; ferredoxin-fold anticodon-binding; tRNA synthetase B5; SPTR: C1YVE0 Phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B [...] | 0.863 |
Ndas_3166 | polA | Ndas_3166 | Ndas_0959 | COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583:IPR006982:IPR002932:IPR002489:IPR 013785:IPR001202:IPR017932; KEGG: tfu:Tfu_1173 glutamate synthase (NADH) large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: C1YUQ7 Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.769 |
Ndas_3660 | Ndas_0572 | Ndas_3660 | Ndas_0572 | DNA-(apurinic or apyrimidinic site) lyase; COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR010979:IPR012319:IPR015886:IPR015887:IPR 000214; KEGG: tfu:Tfu_0694 putative DNA repair hydrolase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: C1YR34 DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; Belongs to the FPG family. | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | 0.602 |
Ndas_3660 | guaA | Ndas_3660 | Ndas_4006 | DNA-(apurinic or apyrimidinic site) lyase; COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR010979:IPR012319:IPR015886:IPR015887:IPR 000214; KEGG: tfu:Tfu_0694 putative DNA repair hydrolase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: C1YR34 DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; Belongs to the FPG family. | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | 0.481 |
Ndas_3660 | mutM | Ndas_3660 | Ndas_0213 | DNA-(apurinic or apyrimidinic site) lyase; COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR010979:IPR012319:IPR015886:IPR015887:IPR 000214; KEGG: tfu:Tfu_0694 putative DNA repair hydrolase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: C1YR34 DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; Belongs to the FPG family. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.409 |
Ndas_3660 | polA | Ndas_3660 | Ndas_0959 | DNA-(apurinic or apyrimidinic site) lyase; COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR010979:IPR012319:IPR015886:IPR015887:IPR 000214; KEGG: tfu:Tfu_0694 putative DNA repair hydrolase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: C1YR34 DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; Belongs to the FPG family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.923 |
glyQS | Ndas_0572 | Ndas_0740 | Ndas_0572 | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR001098:IPR002298; KEGG: sro:Sros_6678 DNA polymerase I - 3'-5' exonuclease and polymerase domains-like protein; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: C1YLH9 DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; PFAM: DNA polymerase family A. | 0.561 |