STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Ndas_1032Thiazolinyl imide reductase; COGs: COG4693 Oxidoreductase (NAD-binding) involved in siderophore biosynthesis; InterPro IPR010091:IPR000683:IPR016040; KEGG: sco:SCO7685 hypothetical protein; PFAM: oxidoreductase domain protein; SPTR: C1YVM7 Thiazolinyl imide reductase; TIGRFAM: thiazolinyl imide reductase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: thiazolinyl imide reductase. (378 aa)    
Predicted Functional Partners:
Ndas_1030
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR001242:IPR013624:IPR000873:IPR 013217:IPR006163:IPR001031:IPR009081:IPR006162:IPR020845; KEGG: sco:SCO7683 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Non-ribosomal peptide synthetase; Methyltransferase type 12; phosphopantetheine-binding; Thioesterase; SPTR: C1YVM9 Amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: Thioester [...]
  
 0.972
Ndas_1029
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR006163:IPR001242:IPR013624:IPR 000873:IPR009081:IPR006162:IPR020845; KEGG: sco:SCO7682 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; SPTR: C1YVN0 Amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding e [...]
  
 0.958
Ndas_1031
NAD-dependent epimerase/dehydratase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR001509:IPR016040; KEGG: sco:SCO7684 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YVM8 Saccharopine dehydrogenase-like oxidoreductase; PFAM: Saccharopine dehydrogenase.
 
   
 0.951
Ndas_1762
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR009081:IPR006162:IPR020845:IPR010071:IPR 006163:IPR001242:IPR013624:IPR000873; KEGG: sro:Sros_3766 amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; SPTR: C1YNX1 Amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; [...]
  
 0.924
Ndas_1759
Thiazolinyl imide reductase; COGs: COG4693 Oxidoreductase (NAD-binding) involved in siderophore biosynthesis; InterPro IPR016040:IPR010091:IPR000683; KEGG: sro:Sros_3769 hypothetical protein; PFAM: oxidoreductase domain protein; SPTR: C1YNX4 Thiazolinyl imide reductase; TIGRFAM: thiazolinyl imide reductase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: thiazolinyl imide reductase.
  
  
 
0.908
Ndas_1761
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020845:IPR009081:IPR001242:IPR000873:IPR 006162:IPR013217:IPR001031:IPR006163:IPR020459:IPR010071:I PR013624; KEGG: sro:Sros_3767 pyochelin synthetase F; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Methyltransferase type 12; Thioesterase; phosphopantetheine-binding; Non-ribosomal peptide synthetase; SPTR: C1YNX2 Amino acid adenylation enzyme/thioester reductase family protein; TIGRFAM: amino acid adenylation domain protein; PFAM: Phos [...]
  
 0.881
Ndas_1033
Oleoyl-(acyl-carrier-protein) hydrolase; COGs: COG3208 thioesterase involved in non-ribosomal peptide biosynthesis; InterPro IPR001031; KEGG: sco:SCO7687 thioesterase; PFAM: Thioesterase; PRIAM: Oleoyl-[acyl-carrier-protein] hydrolase; SPTR: C1YVM6 Predicted thioesterase involved in non-ribosomal peptide biosynthesis; PFAM: Thioesterase domain.
 
  
 0.862
Ndas_1028
AMP-dependent synthetase and ligase; COGs: COG1021 Peptide arylation protein; InterPro IPR020845:IPR000873; KEGG: sco:SCO7681 AMP-binding ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YVN1 Peptide arylation enzyme; PFAM: AMP-binding enzyme; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase.
 
  
 0.814
Ndas_1034
Methyltransferase type 12; InterPro IPR013217; KEGG: sco:SCO7688 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: C1YVM5 Methyltransferase family protein; PFAM: Methyltransferase domain.
 
     0.797
Ndas_1760
NAD-dependent epimerase/dehydratase; InterPro IPR016040:IPR001509; KEGG: sro:Sros_3768 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: C1YNX3 Saccharopine dehydrogenase-like oxidoreductase; PFAM: Saccharopine dehydrogenase.
 
   
 0.792
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
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