Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ndas_1663Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: rha:RHA1_ro01781 endoribonuclease; PFAM: Endoribonuclease L-PSP; SPTR: C1YJH6 Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP. (140 aa)    
Predicted Functional Partners:
Ndas_1664
FAD dependent oxidoreductase; COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR013027:IPR006076; KEGG: aau:AAur_0571 putative flavin-binding monooxygenase-like; PFAM: FAD dependent oxidoreductase; SPTR: C1YJH5 Predicted flavoprotein involved in K+ transport; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
    0.983
Ndas_1662
Protein of unknown function DUF1028; COGs: COG3342 conserved hypothetical protein; InterPro IPR010430; KEGG: aau:AAur_0574 hypothetical protein; PFAM: protein of unknown function DUF1028; SPTR: C1YJH7 Uncharacterized conserved protein; PFAM: Family of unknown function (DUF1028).
 
     0.947
Ndas_1661
Amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR017144:IPR011650:IPR010168:IPR002933; KEGG: aau:AAur_0573 putative amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: C1YJH8 Amidohydrolase; TIGRFAM: amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; Belongs to the peptidase M20A family.
 
   
 0.843
Ndas_2646
Protein of unknown function DUF1028; COGs: COG3342 conserved hypothetical protein; InterPro IPR010430; KEGG: ddr:Deide_3p02220 hypothetical protein; PFAM: protein of unknown function DUF1028; SPTR: C1YKK6 Uncharacterized conserved protein; PFAM: Family of unknown function (DUF1028).
 
     0.701
Ndas_1666
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119:IPR011991; KEGG: mjl:Mjls_2639 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: C1YJH3 Transcriptional regulator, COG0583; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain.
 
     0.662
Ndas_2099
Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: sen:SACE_3661 ribonuclease; PFAM: Endoribonuclease L-PSP; SPTR: C1YMS8 Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP.
  
     0.568
Ndas_1665
Major facilitator superfamily MFS_1; COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR005829:IPR011701:IPR016196; KEGG: cgt:cgR_0768 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: C1YJH4 Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily.
  
    0.500
Ndas_0234
Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: tfu:Tfu_0673 hypothetical protein; PFAM: Endoribonuclease L-PSP; SPTR: C1YHP4 Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP.
  
     0.472
Ndas_5489
Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175:IPR006056; KEGG: bfa:Bfae_04590 endoribonuclease L-PSP, putative; PFAM: Endoribonuclease L-PSP; SPTR: C1YPU3 Endoribonuclease L-PSP, putative; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative.
  
     0.415
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.