STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ndas_2891KEGG: sgr:SGR_1676 hypothetical protein; SPTR: C1YJV5 Putative uncharacterized protein. (357 aa)    
Predicted Functional Partners:
Ndas_1204
Hypothetical protein; KEGG: GA27442 gene product from transcript GA27442-RA; SPTR: C1YTJ6 Putative uncharacterized protein.
  
     0.723
Ndas_0650
KEGG: sgr:SGR_1770 hypothetical protein; SPTR: C1YNL1 Putative uncharacterized protein.
  
     0.719
Ndas_4169
KEGG: tcu:Tcur_4806 hypothetical protein; SPTR: C1YG21 Putative uncharacterized protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.683
Ndas_1214
InterPro IPR006118; KEGG: hypothetical protein; SPTR: C1YTI6 Putative uncharacterized protein.
  
     0.681
Ndas_1215
Hypothetical protein; KEGG: GA28568 gene product from transcript GA28568-RA; SPTR: C1YTI6 Putative uncharacterized protein.
  
     0.673
Ndas_4329
KEGG: sco:SCO1025 integral membrane protein; SPTR: C1YGT1 Putative uncharacterized protein.
  
   0.658
Ndas_1201
KEGG: mgm:Mmc1_2179 putative outer membrane adhesin like protein; SPTR: C1YTJ9 Putative uncharacterized protein.
  
     0.617
Ndas_2525
Hypothetical protein; KEGG: proteophosphoglycan 5; SPTR: C1YM06 Putative uncharacterized protein (Fragment).
  
     0.614
Ndas_4193
Zeta toxin family protein; InterPro IPR010488; KEGG: bvi:Bcep1808_7664 zeta toxin family protein; PFAM: Zeta toxin family protein; SPTR: C1YH19 Zeta toxin; PFAM: Zeta toxin.
  
     0.613
Ndas_1034
Methyltransferase type 12; InterPro IPR013217; KEGG: sco:SCO7688 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: C1YVM5 Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.605
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.