STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ndas_3775COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tcu:Tcur_4093 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: C1YL78 Glycosyl transferase; PFAM: Glycosyl transferase family 2. (311 aa)    
Predicted Functional Partners:
Ndas_3774
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_2522 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: C1YL79 Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
 
 0.920
Ndas_3776
KEGG: tcu:Tcur_4094 hypothetical protein; SPTR: C1YL77 Putative uncharacterized protein.
 
 
 0.848
Ndas_3981
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: sro:Sros_8603 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: C1YKL8 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphos [...]
 
  
 0.678
Ndas_3773
KEGG: tfu:Tfu_2521 hypothetical protein; SPTR: C1YL80 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104).
 
  
 0.672
Ndas_3702
KEGG: tfu:Tfu_0547 hypothetical protein; SPTR: C1YU33 Putative uncharacterized protein.
  
    0.484
Ndas_3707
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tfu:Tfu_2468 putative glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: C1YU28 Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
 
 0.472
Ndas_3777
AMP-dependent synthetase and ligase; InterPro IPR000873:IPR017523; KEGG: tfu:Tfu_2525 hypothetical protein; PFAM: AMP-dependent synthetase and ligase; SPTR: C1YL76 Putative uncharacterized protein; PFAM: AMP-binding enzyme; TIGRFAM: conserved hypothetical protein TIGR03089.
     
 0.466
Ndas_3417
NERD domain protein; InterPro IPR011528; KEGG: tfu:Tfu_2208 hypothetical protein; PFAM: NERD domain protein; SPTR: C1YQB8 Nuclease-like protein; PFAM: Nuclease-related domain.
  
     0.460
Ndas_3436
KEGG: tfu:Tfu_2230 hypothetical protein; SPTR: C1YQ97 Putative uncharacterized protein.
  
     0.455
Ndas_4349
KEGG: tfu:Tfu_2715 hypothetical protein; SPTR: C1YGR1 Putative uncharacterized protein.
  
    0.452
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
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