STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Ndas_4470FAD dependent oxidoreductase; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR003042:IPR006076; KEGG: sen:SACE_6186 monooxygenase, FAD-binding; PFAM: FAD dependent oxidoreductase; SPTR: C1YG98 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain. (371 aa)    
Predicted Functional Partners:
Ndas_5023
Monooxygenase FAD-binding protein; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR003042; KEGG: pag:PLES_07101 hypothetical protein; PFAM: monooxygenase FAD-binding; SPTR: C1YIE1 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
  
     0.683
Ndas_4471
InterPro IPR011701:IPR016196; KEGG: mva:Mvan_5900 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1YG97 Arabinose efflux permease family protein; PFAM: PUCC protein; Major Facilitator Superfamily.
 
    0.662
Ndas_4469
Transcriptional regulator, TetR family; InterPro IPR001647:IPR009057:IPR011075:IPR012287; KEGG: xce:Xcel_2792 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: C1YG99 Transcriptional regulator, COG1309; PFAM: Bacterial regulatory proteins, tetR family.
 
     0.629
Ndas_0494
Acyl transferase; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR009081:IPR006162:IPR018201:IPR018294:IPR 016038:IPR001227:IPR016040:IPR016039:IPR016035:IPR011032:I PR016036:IPR014030:IPR014031:IPR014043:IPR006163:IPR013154 :IPR013149:IPR002198; KEGG: sgr:SGR_6179 putative type-I PKS; PFAM: Acyl transferase; Beta-ketoacyl synthase; phosphopantetheine-binding; Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; short-chain dehydrogenase/reductase SDR; SPTR: C1YLQ6 Short chain dehydrogenase/beta-ketoacyl synthase/zinc- [...]
 
 
 0.514
Ndas_0496
Acyl transferase; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR009081:IPR006162:IPR018201:IPR000408:IPR 016038:IPR001227:IPR016040:IPR016039:IPR016035:IPR016036:I PR014030:IPR014031:IPR014043:IPR002198:IPR006163:IPR001031 ; KEGG: sgr:SGR_6183 putative type-I PKS; PFAM: Acyl transferase; Beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Thioesterase; SPTR: C1YLQ3 Short chain dehydrogenase/acyltransferase/thioesterase; PFAM: Thioesterase domain; Phosphopantetheine attachment site; Acyl transferase domain; KR domain; [...]
 
 
 0.501
Ndas_3372
Monooxygenase FAD-binding protein; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR003042; KEGG: fra:Francci3_2111 monooxygenase, FAD-binding; PFAM: monooxygenase FAD-binding; SPTR: C1YSY9 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
  
     0.457
idi-2
Isopentenyl-diphosphate delta-isomerase, type 1; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
   
 
 0.433
Ndas_2773
Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835:IPR011991; KEGG: bcv:Bcav_1519 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: C1YK75 Transcriptional regulator; PFAM: MarR family.
  
    0.422
Ndas_4255
InterPro IPR005065; KEGG: sma:SAV_819 lipase; PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; SPTR: C1YFX6 Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II; PFAM: isoform II.
  
     0.402
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
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