STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ndas_4997Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078:IPR001345; KEGG: fal:FRAAL0174 putative phosphoglycerate mutase 2 protein; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase; SPTR: C1YIG7 Fructose-2,6-bisphosphatase; PFAM: Phosphoglycerate mutase family. (238 aa)    
Predicted Functional Partners:
Ndas_1624
COGs: COG1010 Precorrin-3B methylase; InterPro IPR000878:IPR006364:IPR006363:IPR014777; KEGG: svi:Svir_17670 precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: C1YJL6 Precorrin-3 methyltransferase; precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase.
  
  
 0.620
Ndas_4998
InterPro IPR000691; KEGG: ami:Amir_6244 proteinase inhibitor I16 subtilisin-type inhibitor; PFAM: proteinase inhibitor I16 subtilisin-type inhibitor; SPTR: C1YIG6 Subtilisin inhibitor-like protein; PFAM: Subtilisin inhibitor-like.
       0.461
Ndas_4996
KEGG: tfu:Tfu_2874 hypothetical protein; SPTR: C1YIG8 Putative uncharacterized protein.
       0.414
Your Current Organism:
Nocardiopsis dassonvillei
NCBI taxonomy Id: 446468
Other names: N. dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei str. DSM 43111, Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111
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