STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ20179.1ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1/THI5 like. (376 aa)    
Predicted Functional Partners:
ACZ20180.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.851
ACZ20178.1
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase.
 
    0.804
ACZ20181.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.784
ACZ20176.1
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
 
    0.680
ACZ20177.1
Nicotinamidase-like amidase; PFAM: Isochorismatase family.
 
     0.660
ACZ22332.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.569
ACZ20175.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
       0.551
ACZ22330.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.551
ACZ22331.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.528
ACZ21862.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.511
Your Current Organism:
Sanguibacter keddieii
NCBI taxonomy Id: 446469
Other names: S. keddieii DSM 10542, Sanguibacter keddieii DSM 10542, Sanguibacter keddieii str. DSM 10542, Sanguibacter keddieii strain DSM 10542
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