STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ20758.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
ACZ20237.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
  
 
 0.926
ACZ21378.1
Hypothetical protein.
 
     0.713
ACZ20496.1
Fibronectin type 3 domain-containing protein; PFAM: Fibronectin type III domain; GDSL-like Lipase/Acylhydrolase; TIGRFAM: LPXTG-motif cell wall anchor domain.
  
 
 0.697
ACZ20361.1
Hypothetical protein.
   
 
 0.635
ACZ22799.1
Hypothetical protein.
   
 
 0.590
ACZ20756.1
Hypothetical protein.
       0.533
ACZ20757.1
PFAM: Bacterial regulatory protein, arsR family.
       0.533
ACZ20471.1
Hypothetical protein.
 
 
 0.524
ACZ20865.1
Hypothetical protein.
 
     0.518
ACZ22705.1
Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold.
 
     0.451
Your Current Organism:
Sanguibacter keddieii
NCBI taxonomy Id: 446469
Other names: S. keddieii DSM 10542, Sanguibacter keddieii DSM 10542, Sanguibacter keddieii str. DSM 10542, Sanguibacter keddieii strain DSM 10542
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.