Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACZ21119.1 | ACZ21178.1 | Sked_11760 | Sked_12360 | PFAM: Acetyltransferase (GNAT) family. | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | 0.420 |
ACZ21175.1 | ACZ21176.1 | Sked_12330 | Sked_12340 | Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family. | Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | 0.571 |
ACZ21175.1 | ACZ21177.1 | Sked_12330 | Sked_12350 | Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family. | Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF336); Belongs to the UPF0303 family. | 0.558 |
ACZ21175.1 | ACZ21178.1 | Sked_12330 | Sked_12360 | Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family. | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | 0.427 |
ACZ21176.1 | ACZ21175.1 | Sked_12340 | Sked_12330 | Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family. | 0.571 |
ACZ21176.1 | ACZ21177.1 | Sked_12340 | Sked_12350 | Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF336); Belongs to the UPF0303 family. | 0.773 |
ACZ21176.1 | ACZ21178.1 | Sked_12340 | Sked_12360 | Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | 0.577 |
ACZ21176.1 | ACZ21179.1 | Sked_12340 | Sked_12370 | Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | Predicted branched-chain amino acid permease (azaleucine resistance); PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC. | 0.431 |
ACZ21176.1 | ACZ21180.1 | Sked_12340 | Sked_12380 | Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | PFAM: Branched-chain amino acid transport protein (AzlD). | 0.431 |
ACZ21177.1 | ACZ21175.1 | Sked_12350 | Sked_12330 | Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF336); Belongs to the UPF0303 family. | Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family. | 0.558 |
ACZ21177.1 | ACZ21176.1 | Sked_12350 | Sked_12340 | Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF336); Belongs to the UPF0303 family. | Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | 0.773 |
ACZ21177.1 | ACZ21178.1 | Sked_12350 | Sked_12360 | Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF336); Belongs to the UPF0303 family. | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | 0.576 |
ACZ21177.1 | ACZ21179.1 | Sked_12350 | Sked_12370 | Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF336); Belongs to the UPF0303 family. | Predicted branched-chain amino acid permease (azaleucine resistance); PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC. | 0.431 |
ACZ21177.1 | ACZ21180.1 | Sked_12350 | Sked_12380 | Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF336); Belongs to the UPF0303 family. | PFAM: Branched-chain amino acid transport protein (AzlD). | 0.431 |
ACZ21178.1 | ACZ21119.1 | Sked_12360 | Sked_11760 | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | PFAM: Acetyltransferase (GNAT) family. | 0.420 |
ACZ21178.1 | ACZ21175.1 | Sked_12360 | Sked_12330 | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | Predicted nucleoside-diphosphate sugar epimerase; PFAM: NmrA-like family. | 0.427 |
ACZ21178.1 | ACZ21176.1 | Sked_12360 | Sked_12340 | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | Predicted transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | 0.577 |
ACZ21178.1 | ACZ21177.1 | Sked_12360 | Sked_12350 | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | Uncharacterized conserved protein; PFAM: Domain of unknown function (DUF336); Belongs to the UPF0303 family. | 0.576 |
ACZ21178.1 | ACZ21179.1 | Sked_12360 | Sked_12370 | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | Predicted branched-chain amino acid permease (azaleucine resistance); PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC. | 0.577 |
ACZ21178.1 | ACZ21180.1 | Sked_12360 | Sked_12380 | ADP-ribose pyrophosphatase; PFAM: NUDIX domain. | PFAM: Branched-chain amino acid transport protein (AzlD). | 0.577 |
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