Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACZ23152.1 | ACZ23153.1 | Sked_32570 | Sked_32580 | PFAM: TAP-like protein; alpha/beta hydrolase fold. | TIGRFAM: DNA polymerase III, delta' subunit. | 0.617 |
ACZ23152.1 | ACZ23155.1 | Sked_32570 | Sked_32600 | PFAM: TAP-like protein; alpha/beta hydrolase fold. | PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | 0.471 |
ACZ23152.1 | tmk | Sked_32570 | Sked_32590 | PFAM: TAP-like protein; alpha/beta hydrolase fold. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.665 |
ACZ23153.1 | ACZ23152.1 | Sked_32580 | Sked_32570 | TIGRFAM: DNA polymerase III, delta' subunit. | PFAM: TAP-like protein; alpha/beta hydrolase fold. | 0.617 |
ACZ23153.1 | ACZ23155.1 | Sked_32580 | Sked_32600 | TIGRFAM: DNA polymerase III, delta' subunit. | PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | 0.543 |
ACZ23153.1 | tmk | Sked_32580 | Sked_32590 | TIGRFAM: DNA polymerase III, delta' subunit. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.872 |
ACZ23155.1 | ACZ23152.1 | Sked_32600 | Sked_32570 | PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | PFAM: TAP-like protein; alpha/beta hydrolase fold. | 0.471 |
ACZ23155.1 | ACZ23153.1 | Sked_32600 | Sked_32580 | PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | TIGRFAM: DNA polymerase III, delta' subunit. | 0.543 |
ACZ23155.1 | tmk | Sked_32600 | Sked_32590 | PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.540 |
tmk | ACZ23152.1 | Sked_32590 | Sked_32570 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | PFAM: TAP-like protein; alpha/beta hydrolase fold. | 0.665 |
tmk | ACZ23153.1 | Sked_32590 | Sked_32580 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | TIGRFAM: DNA polymerase III, delta' subunit. | 0.872 |
tmk | ACZ23155.1 | Sked_32590 | Sked_32600 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | 0.540 |