STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ23548.1PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain. (543 aa)    
Predicted Functional Partners:
ACZ22996.1
Chemotaxis protein histidine kinase-like protein; PFAM: Hpt domain; CheW-like domain; Signal transducing histidine kinase, homodimeric domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.899
ACZ22995.1
PFAM: CheW-like domain.
 
 
 0.896
ACZ22987.1
MCP methyltransferase, CheR-type; PFAM: Methyltransferase domain; CheR methyltransferase, all-alpha domain.
 
 
 0.853
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.851
ACZ22984.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain.
 
 
 0.751
ACZ22986.1
PFAM: Response regulator receiver domain.
 
 
 0.740
ACZ20510.1
PAS domain S-box; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
 
 0.720
ACZ23549.1
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; HAMP domain.
 
    
0.449
ACZ23021.1
Flagellar basal-body rod protein FlgC; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
 
 0.440
ACZ23009.1
Flagellar motor component; PFAM: MotA/TolQ/ExbB proton channel family.
 
  
 0.438
Your Current Organism:
Sanguibacter keddieii
NCBI taxonomy Id: 446469
Other names: S. keddieii DSM 10542, Sanguibacter keddieii DSM 10542, Sanguibacter keddieii str. DSM 10542, Sanguibacter keddieii strain DSM 10542
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