Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACZ23603.1 | ACZ23604.1 | Sked_37200 | Sked_37210 | Methionine synthase II (cobalamin-independent). | PFAM: Bacterial regulatory proteins, tetR family. | 0.498 |
ACZ23603.1 | ACZ23605.1 | Sked_37200 | Sked_37220 | Methionine synthase II (cobalamin-independent). | Predicted RND superfamily drug exporter. | 0.406 |
ACZ23604.1 | ACZ23603.1 | Sked_37210 | Sked_37200 | PFAM: Bacterial regulatory proteins, tetR family. | Methionine synthase II (cobalamin-independent). | 0.498 |
ACZ23604.1 | ACZ23605.1 | Sked_37210 | Sked_37220 | PFAM: Bacterial regulatory proteins, tetR family. | Predicted RND superfamily drug exporter. | 0.778 |
ACZ23604.1 | ACZ23606.1 | Sked_37210 | Sked_37230 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | 0.410 |
ACZ23604.1 | ACZ23607.1 | Sked_37210 | Sked_37240 | PFAM: Bacterial regulatory proteins, tetR family. | ADP-ribose pyrophosphatase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family. | 0.402 |
ACZ23605.1 | ACZ23603.1 | Sked_37220 | Sked_37200 | Predicted RND superfamily drug exporter. | Methionine synthase II (cobalamin-independent). | 0.406 |
ACZ23605.1 | ACZ23604.1 | Sked_37220 | Sked_37210 | Predicted RND superfamily drug exporter. | PFAM: Bacterial regulatory proteins, tetR family. | 0.778 |
ACZ23605.1 | ACZ23606.1 | Sked_37220 | Sked_37230 | Predicted RND superfamily drug exporter. | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | 0.464 |
ACZ23605.1 | ACZ23607.1 | Sked_37220 | Sked_37240 | Predicted RND superfamily drug exporter. | ADP-ribose pyrophosphatase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family. | 0.456 |
ACZ23606.1 | ACZ23604.1 | Sked_37230 | Sked_37210 | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | PFAM: Bacterial regulatory proteins, tetR family. | 0.410 |
ACZ23606.1 | ACZ23605.1 | Sked_37230 | Sked_37220 | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | Predicted RND superfamily drug exporter. | 0.464 |
ACZ23606.1 | ACZ23607.1 | Sked_37230 | Sked_37240 | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | ADP-ribose pyrophosphatase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family. | 0.757 |
ACZ23607.1 | ACZ23604.1 | Sked_37240 | Sked_37210 | ADP-ribose pyrophosphatase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family. | PFAM: Bacterial regulatory proteins, tetR family. | 0.402 |
ACZ23607.1 | ACZ23605.1 | Sked_37240 | Sked_37220 | ADP-ribose pyrophosphatase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family. | Predicted RND superfamily drug exporter. | 0.456 |
ACZ23607.1 | ACZ23606.1 | Sked_37240 | Sked_37230 | ADP-ribose pyrophosphatase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family. | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | 0.757 |