STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (551 aa)    
Predicted Functional Partners:
hutI
TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: acp:A2cp1_2448 imidazolonepropionase.
 
 0.999
Snas_3094
KEGG: ank:AnaeK_2046 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
 
 0.998
Snas_5061
PFAM: phenylalanine/histidine ammonia-lyase; KEGG: xau:Xaut_1004 histidine ammonia-lyase.
 
 0.997
Snas_0098
Hypothetical protein; KEGG: mrd:Mrad2831_3705 helicase domain-containing protein.
       0.773
Snas_2244
PFAM: amidohydrolase; KEGG: oca:OCAR_7510 aryldialkylphosphatase.
  
  
 0.729
Snas_3072
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ccs:CCNA_02050 dihydroorotase.
  
  
 0.729
Snas_5218
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bpt:Bpet1263 putative prolidase.
  
  
 0.729
Snas_5775
TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: acp:A2cp1_0596 formiminoglutamate deiminase.
 
  
 0.721
Snas_0101
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2739 short-chain dehydrogenase/reductase SDR.
       0.615
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.592
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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