STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_0591TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_9253 glutamine ABC transporter. (285 aa)    
Predicted Functional Partners:
Snas_0590
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dat:HRM2_23010 GlnQ5.
 0.998
Snas_0592
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: eta:ETA_22070 glutamine high-affinity transporter.
 0.998
Snas_0861
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: mlo:mll5423 hypothetical protein.
 
 0.985
Snas_3983
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_3047 ABC transporter related.
 
 0.935
Snas_4597
KEGG: sme:SM_b20427 putative amino acid ABC transporter ATP-binding protein; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.931
Snas_4887
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: aav:Aave_3756 extracellular solute-binding protein.
 
 0.852
Snas_3984
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: dac:Daci_4387 extracellular solute-binding protein.
 
 0.850
Snas_4553
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: dde:Dde_1429 extracellular solute-binding protein.
 
 
 0.834
Snas_4600
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pap:PSPA7_4374 ectoine/hydroxyectoine ABC transporter solute-binding protein.
 
 
 0.764
Snas_3986
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit.
  
 
0.719
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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