STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_0661Hypothetical protein. (287 aa)    
Predicted Functional Partners:
Snas_0662
PFAM: PfkB domain protein; KEGG: cko:CKO_03986 hypothetical protein.
  
 0.978
Snas_0660
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: ccs:CCNA_01359 myo-inositol catabolism protein IolB.
 
    0.965
Snas_0659
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: avn:Avin_50100 myo-inositol catabolism protein IolD; Belongs to the TPP enzyme family.
 
  
 0.960
Snas_0657
Myo-inosose-2 dehydratase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: avi:Avi_7455 hypothetical protein.
 
     0.952
Snas_0656
KEGG: lch:Lcho_2410 periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.907
iolG
Oxidoreductase domain protein; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
     0.894
Snas_0654
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcs:BCAN_A1367 hypothetical protein.
 
  
 0.853
Snas_0655
PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_PC0000704 probable sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.845
Snas_0658
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: ank:AnaeK_1629 methylmalonate-semialdehyde dehydrogenase.
 
  
 0.828
Snas_5310
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.754
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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