STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_0786PFAM: ABC-2 type transporter; KEGG: har:HEAR2357 ABC-type drug export system, membrane protein. (254 aa)    
Predicted Functional Partners:
Snas_0785
KEGG: ade:Adeh_3915 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.954
Snas_1447
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acp:A2cp1_4055 daunorubicin resistance ABC transporter ATPase subunit.
 
    0.823
Snas_4762
KEGG: mes:Meso_2101 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.815
Snas_5104
KEGG: geo:Geob_0012 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.814
Snas_1840
KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.812
Snas_5589
KEGG: mes:Meso_2101 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.812
Snas_6376
KEGG: ade:Adeh_3915 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.806
Snas_0505
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce5573 putative ABC transporter ATP- binding protein.
 
    0.702
Snas_5132
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_2048 ABC-2 type transporter.
  
  
  0.667
Snas_5131
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce5573 putative ABC transporter ATP- binding protein.
 
    0.627
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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