STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_0921PFAM: metallophosphoesterase; KEGG: scl:sce2733 bis(5'-nucleosyl)- tetraphosphatase (symmetrical). (847 aa)    
Predicted Functional Partners:
Snas_0920
PFAM: Methyltransferase type 12; KEGG: scl:sce2734 ubiquinone/menaquinone biosynthesis methyltransferase UbiE.
 
   0.981
Snas_0147
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bba:Bd3625 3-demethylubiquinone-9 3- methyltransferase.
   
   0.557
Snas_0192
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Methyltransferase type 11; Methyltransferase type 12; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
   
   0.557
Snas_0746
PFAM: LicD family protein; KEGG: pat:Patl_3212 coagulation factor 5/8 type- like.
   
   0.557
Snas_1943
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: scl:sce5872 putative SAM-dependent methyltransferase.
   
   0.557
Snas_2869
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rlt:Rleg2_1533 methyltransferase type 12.
   
   0.557
Snas_2920
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: mxa:MXAN_0433 hypothetical protein.
   
   0.557
Snas_3917
PFAM: Methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; thiopurine S- methyltransferase; Methyltransferase type 12; KEGG: ank:AnaeK_0186 methyltransferase type 11.
   
   0.557
Snas_4196
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: pfo:Pfl01_1891 UbiE/COQ5 methyltransferase.
   
   0.557
Snas_4926
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: plu:plu1636 putative metallothionein SmtA.
   
   0.557
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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