STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_0947Hypothetical protein. (410 aa)    
Predicted Functional Partners:
Snas_0948
Hypothetical protein; KEGG: pmy:Pmen_2781 anion transporter.
 
    0.963
Snas_0945
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: ara:Arad_4162 polysaccharide biosynthesis associated protein.
 
     0.961
Snas_0946
PFAM: sulfotransferase; KEGG: heparan sulfate sulfotransferase.
 
     0.960
Snas_0949
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bam:Bamb_5116 exopolysaccharide transport protein family.
 
     0.859
Snas_0950
Hypothetical protein; KEGG: scl:sce4867 cellulase; Belongs to the glycosyl hydrolase 26 family.
 
     0.826
Snas_0944
Hypothetical protein; KEGG: mlo:mlr9730 N-methyltransferase-like protein.
       0.822
Snas_1482
PFAM: glycosyl transferase family 2; KEGG: dar:Daro_2413 glycosyl transferase family polysaccharide deacetylase.
  
     0.767
Snas_1483
KEGG: sme:SM_b21237 sulfotransferase domain- containing protein.
  
     0.751
Snas_5243
Hypothetical protein; KEGG: scl:sce4867 cellulase; Belongs to the glycosyl hydrolase 26 family.
  
     0.744
Snas_5680
PFAM: 3-dehydroquinate synthase; iron-containing alcohol dehydrogenase; KEGG: scl:sce5394 glycerol-1-phosphate dehydrogenase (NAD(P)(+)).
  
   
 0.698
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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