STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1100Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (260 aa)    
Predicted Functional Partners:
Snas_1099
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: scl:sce1135 ABC-type molybdate transporter, substrate-binding protein.
 
 
 0.999
Snas_1554
KEGG: mrd:Mrad2831_3414 hypothetical protein.
  
 
 0.960
Snas_2333
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ara:Arad_12343 ABC transporter.
    
 0.925
Snas_2289
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rlt:Rleg2_5747 ABC transporter related; Belongs to the ABC transporter superfamily.
     0.912
Snas_1407
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rhi:NGR234_282 Y4oS; Belongs to the ABC transporter superfamily.
     0.908
Snas_5606
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2857 ABC transporter-related protein.
   
 0.907
Snas_3844
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mch:Mchl_1194 ABC transporter related.
 
    
 0.896
Snas_4070
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003614 sn-glycerol-3-phosphate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
     0.894
Snas_1033
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL120755 putative ATP-binding component of ABC transporter.
 
      0.891
Snas_0020
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ank:AnaeK_4268 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
     0.889
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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