STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1255PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; PKD domain containing protein; proteinase inhibitor I9 subtilisin propeptide; SMART: PKD domain containing protein; KEGG: mca:MCA0875 serine protease. (601 aa)    
Predicted Functional Partners:
Snas_5491
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: nmu:Nmul_A1888 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.749
Snas_1254
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: xau:Xaut_0995 protein kinase.
       0.500
Snas_1256
Hypothetical protein.
       0.442
Snas_1253
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S15; KEGG: afw:Anae109_2431 peptidase S9B dipeptidylpeptidase IV subunit.
  
    0.425
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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