STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1654Hypothetical protein. (334 aa)    
Predicted Functional Partners:
Snas_1655
Hypothetical protein.
       0.732
Snas_1656
PFAM: aldo/keto reductase; KEGG: scl:sce5264 putative sugar-phosphate dehydrogenase.
       0.661
Snas_1653
PFAM: beta-lactamase domain protein; KEGG: tgr:Tgr7_0582 beta-lactamase domain protein.
       0.566
Snas_1657
PFAM: Protein of unknown function DUF676 hydrolase domain protein; KEGG: scl:sce3803 putative ATP/GTP-binding protein.
       0.418
Snas_1658
PFAM: Tetratricopeptide TPR_4; KEGG: hypothetical protein.
       0.418
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.