STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1663Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pag:PLES_23911 putative transcriptional regulator. (280 aa)    
Predicted Functional Partners:
Snas_2667
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: ara:Arad_0713 hypothetical protein.
 
     0.633
Snas_3367
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: mxa:MXAN_5099 putative transcriptional regulator.
 
     0.631
Snas_3919
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: mxa:MXAN_5099 putative transcriptional regulator.
 
     0.564
Snas_1664
PFAM: major facilitator superfamily MFS_1; KEGG: ank:AnaeK_4388 major facilitator superfamily MFS_1.
       0.561
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
   0.490
Snas_2353
PFAM: thymidylate kinase; KEGG: xau:Xaut_4325 dTMP kinase.
   
   0.468
Snas_4491
TIGRFAM: cytidyltransferase-related domain protein; KEGG: pmy:Pmen_1542 ATPase/kinase involved in NAD metabolism-like protein.
   
    0.437
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.