STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1695KEGG: bvi:Bcep1808_3804 alpha/beta hydrolase fold. (292 aa)    
Predicted Functional Partners:
Snas_1279
NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 
 0.728
Snas_1278
TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: NADH-ubiquinone oxidoreductase 24 kda subunit; K03943 NADH dehydrogenase (ubiquinone) flavoprotein 2.
   
   0.665
Snas_3331
Hypothetical protein; KEGG: mpt:Mpe_A0724 beta-glucanase/beta-glucan synthetase-like protein.
  
     0.625
Snas_1694
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: scl:sce6697 putative transcriptional regulator.
 
     0.589
Snas_1280
NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
   
 
 0.572
Snas_4108
PFAM: ferredoxin; KEGG: bmj:BMULJ_05532 uncharacterized NAD(FAD)- dependent dehydrogenase.
   
 
 0.572
Snas_3560
SMART: Integrin alpha beta-propellor repeat protein; KEGG: scl:sce5660 hypothetical protein.
  
     0.567
Snas_3405
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dac:Daci_5402 transcriptional regulator, TrmB.
  
     0.547
Snas_0906
SMART: Integrin alpha beta-propellor repeat protein; KEGG: scl:sce5660 hypothetical protein.
  
     0.542
Snas_0907
SMART: Integrin alpha beta-propellor repeat protein; KEGG: scl:sce5660 hypothetical protein.
  
     0.540
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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