STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1735PFAM: bifunctional deaminase-reductase domain protein; KEGG: mxa:MXAN_1250 riboflavin biosynthesis protein RibD domain-containing protein. (193 aa)    
Predicted Functional Partners:
Snas_5750
PFAM: bifunctional deaminase-reductase domain protein; KEGG: lpp:lpp1969 hypothetical protein.
  
     0.770
Snas_2640
PFAM: bifunctional deaminase-reductase domain protein; KEGG: dia:Dtpsy_1834 bifunctional deaminase- reductase domain protein.
  
     0.753
Snas_3970
KEGG: dac:Daci_3022 deaminase-reductase domain- containing protein.
  
     0.740
Snas_1734
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: scl:sce5431 two-component system response regulator.
       0.645
Snas_1736
KEGG: bcn:Bcen_1549 integral membrane protein.
       0.553
Snas_3694
PFAM: bifunctional deaminase-reductase domain protein; KEGG: ank:AnaeK_1068 bifunctional deaminase- reductase domain protein.
 
     0.536
Snas_3571
PFAM: bifunctional deaminase-reductase domain protein; KEGG: rec:RHECIAT_PC0000110 putative riboflavin biosynthesis protein.
  
     0.530
Snas_3340
PFAM: bifunctional deaminase-reductase domain protein; KEGG: rec:RHECIAT_PC0000110 putative riboflavin biosynthesis protein.
  
     0.500
Snas_1733
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: scl:sce5432 putative two-component system sensor kinase.
       0.498
Snas_1904
PFAM: bifunctional deaminase-reductase domain protein; KEGG: afw:Anae109_3251 deaminase-reductase domain- containing protein.
 
     0.487
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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