STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1844PFAM: protein of unknown function DUF58; KEGG: mxa:MXAN_4679 hypothetical protein. (436 aa)    
Predicted Functional Partners:
Snas_1846
KEGG: scl:sce1390 hypothetical protein.
 
  
 0.955
Snas_1847
Hypothetical protein.
 
  
 0.952
Snas_1845
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: scl:sce1389 putative regulatory protein.
  
 0.945
Snas_1848
Hypothetical protein.
       0.837
Snas_1613
PFAM: protein of unknown function DUF95 transmembrane; KEGG: mxa:MXAN_3115 hypothetical protein.
 
  
 0.831
Snas_1614
PFAM: RDD domain containing protein; KEGG: psb:Psyr_4021 RDD.
 
    0.793
purD
KEGG: ccs:CCNA_00299 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; Belongs to the GARS family.
      
 0.648
Snas_1850
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase.
       0.645
Snas_1851
KEGG: hypopthetical protein.
       0.645
Snas_1621
PFAM: HpcH/HpaI aldolase; KEGG: ade:Adeh_0181 citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
      
 0.622
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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