STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1900Hypothetical protein; KEGG: afw:Anae109_2327 cell surface receptor IPT/TIG domain-containing protein. (504 aa)    
Predicted Functional Partners:
Snas_1901
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein.
 
   0.890
Snas_1899
Hypothetical protein; KEGG: hdu:HD1150 G-3-P permease.
 
  
0.871
Snas_1902
Histidine kinase; KEGG: scl:sce5432 putative two-component system sensor kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
    0.728
Snas_5940
Hypothetical protein.
  
     0.623
Snas_6374
Transcriptional regulator, winged helix family; PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: scl:sce5225 protein kinase.
  
     0.590
Snas_5015
PFAM: Male sterility domain; alpha/beta hydrolase fold; NAD-dependent epimerase/dehydratase; KEGG: scl:sce2177 hypothetical protein.
  
     0.576
Snas_5641
PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_0436 protein of unknown function DUF214.
  
    0.572
Snas_1903
Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator.
       0.554
Snas_2694
PFAM: OsmC family protein; KEGG: avi:Avi_0834 hypothetical protein.
  
    0.552
Snas_4092
KEGG: hypothetical protein.
  
     0.531
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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