STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1908PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: oan:Oant_2127 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (357 aa)    
Predicted Functional Partners:
Snas_1907
PFAM: Domain of unknown function DUF1801; KEGG: nha:Nham_3358 hypothetical protein.
 
     0.608
Snas_1909
PFAM: Amidase; KEGG: hha:Hhal_1975 amidase; Belongs to the amidase family.
       0.581
Snas_1910
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: maq:Maqu_2214 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
       0.581
Snas_1906
PFAM: transcriptional coactivator/pterin dehydratase; KEGG: oca:OCAR_4303 pterin-4-alpha-carbinolamine dehydratase (PHS).
       0.478
Snas_1905
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: msl:Msil_0872 alcohol dehydrogenase GroES domain protein.
       0.433
Snas_1911
PFAM: Asp/Glu/hydantoin racemase; KEGG: bbr:BB1531 putative decarboxylase.
       0.424
Snas_2211
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bbt:BBta_7268 cation efflux system protein CzcD.
  
    0.409
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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