STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1948PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1. (524 aa)    
Predicted Functional Partners:
Snas_1949
KEGG: rpe:RPE_4715 hypothetical protein.
       0.689
Snas_1947
PFAM: helix-turn-helix HxlR type; KEGG: bpe:BP0829 putative transcriptional regulator.
       0.534
Snas_3794
KEGG: afw:Anae109_0991 major facilitator transporter.
  
     0.498
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.