STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1978PFAM: FAD dependent oxidoreductase; KEGG: afw:Anae109_3492 FAD dependent oxidoreductase. (534 aa)    
Predicted Functional Partners:
Snas_3593
Hypothetical protein; KEGG: mex:Mext_3009 magnesium chelatase subunit D.
 
  
 0.720
Snas_1976
KEGG: hypothetical protein.
       0.678
Snas_1977
KEGG: hypothetical protein.
       0.678
Snas_2380
KEGG: hypothetical protein LOC100120494.
  
     0.560
Snas_6199
PFAM: alpha/beta hydrolase fold; KEGG: bmn:BMA10247_A1026 alpha/beta fold family hydrolase.
  
    0.541
Snas_6301
Domain of unknown function DUF1794; May play a role in the intracellular transport of hydrophobic ligands.
  
    0.536
Snas_1979
PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: csa:Csal_3168 putative transposase, IS891/IS1136/IS1341.
       0.529
Snas_5492
KEGG: Os01g0750600; hypothetical protein.
  
     0.520
Snas_3872
KEGG: TP23; basic proline-rich protein.
  
     0.517
Snas_0890
PFAM: LicD family protein; KEGG: apa:APP7_1640 hypothetical protein.
  
     0.503
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.