STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_1990PFAM: Methyltransferase type 11; KEGG: VTE4; gamma-tocopherol methyltransferase. (280 aa)    
Predicted Functional Partners:
Snas_1991
KEGG: pfo:Pfl01_1841 terpene synthase, metal- binding.
 
   
 0.958
Snas_1992
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: mxa:MXAN_6248 cyclic nucleotide-binding domain-containing protein.
 
   
 0.608
Snas_1993
PFAM: cyclic nucleotide-binding; KEGG: mxa:MXAN_6249 cyclic nucleotide-binding domain-containing protein.
 
   
 0.558
Snas_5090
KEGG: bid:Bind_0192 hypothetical protein.
  
     0.527
Snas_1127
PFAM: Terpene synthase metal-binding domain protein; KEGG: mxa:MXAN_6247 terpene synthase metal-binding domain-containing protein.
      
 0.509
Snas_0737
PFAM: ADP-ribosylation/Crystallin J1; KEGG: hypothetical protein.
  
     0.482
Snas_0677
Hypothetical protein; KEGG: predicted gene, 100041170.
  
     0.474
Snas_4283
PFAM: metallophosphoesterase; MAM protein; KEGG: mxa:MXAN_2579 metallophosphoesterase.
  
     0.463
Snas_4137
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: scl:sce8893 hypothetical protein.
  
     0.455
Snas_4284
Alkaline phosphatase; PFAM: metallophosphoesterase; KEGG: mxa:MXAN_2579 metallophosphoesterase.
  
     0.452
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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