STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2167KEGG: predicted protein. (310 aa)    
Predicted Functional Partners:
Snas_2168
PFAM: glycosyl transferase group 1; KEGG: lpn:lpg1632 glycosyltransferase.
 
     0.840
Snas_2169
Hypothetical protein.
       0.658
Snas_2170
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_5467 metallophosphoesterase.
       0.658
Snas_1293
KEGG: afw:Anae109_1412 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.491
Snas_6387
KEGG: acp:A2cp1_1500 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.491
Snas_0268
KEGG: xfm:Xfasm12_0778 hypothetical protein.
  
     0.464
Snas_0126
KEGG: bcj:BCAL3154 putative glycine-rich surface protein.
  
     0.446
Snas_6451
PFAM: protein of unknown function DUF1707; KEGG: ilo:IL0624 hypothetical protein.
  
     0.430
Snas_1109
KEGG: hypothetical protein.
  
 
   0.424
Snas_4386
PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein; KEGG: acp:A2cp1_0115 UvrD/REP helicase.
    
 
 0.421
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.