STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2261KEGG: bgl:bglu_2g21360 hypothetical protein. (394 aa)    
Predicted Functional Partners:
Snas_2262
KEGG: vei:Veis_4550 hypothetical protein.
  
    0.780
Snas_2263
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_2010 binding-protein-dependent transport systems inner membrane component.
       0.773
Snas_2264
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7001 ABC transporter, permease protein.
       0.773
Snas_2265
PFAM: extracellular solute-binding protein family 1; KEGG: dat:HRM2_25740 ABC-type sugar transport system, periplamsic solute-binding protein.
       0.773
Snas_2260
KEGG: dol:Dole_0910 hypothetical protein.
 
     0.753
Snas_2266
KEGG: spe:Spro_4282 hypothetical protein.
       0.613
Snas_2267
PFAM: ROK family protein; KEGG: ara:Arad_9637 transcriptional regulator protein.
       0.610
Snas_1889
PFAM: Chloramphenicol phosphotransferase family protein; KEGG: mlo:mll3789 weak similarity to chloramphenicol phosphotransferase.
  
     0.492
Snas_2259
PFAM: beta-lactamase; KEGG: ilo:IL1818 beta-lactamase class C family protein.
       0.483
Snas_2151
KEGG: scl:sce7040 hypothetical protein.
  
     0.477
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.