STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2303PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1000 major facilitator transporter. (463 aa)    
Predicted Functional Partners:
Snas_2302
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bgl:bglu_2g02930 transcriptional regulator, MarR family protein.
 
     0.908
Snas_2304
PFAM: protein of unknown function DUF1330; KEGG: bgl:bglu_2g06100 hypothetical protein.
 
     0.888
Snas_3492
PFAM: beta-lactamase domain protein; KEGG: bra:BRADO5469 putative metallo-beta-lactamase family protein.
  
     0.581
Snas_5575
PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_3227 drug resistance transporter, EmrB/QacA subfamily.
  
     0.543
Snas_2586
PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_04854 multidrug resistance protein.
  
     0.525
Snas_5578
PFAM: major facilitator superfamily MFS_1; KEGG: rpi:Rpic_4568 drug resistance transporter, EmrB/QacA subfamily.
  
     0.467
Snas_3201
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: shm:Shewmr7_3619 antibiotic biosynthesis monooxygenase.
  
     0.464
Snas_2726
PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bav:BAV1824 transcriptional regulator.
 
     0.442
Snas_3491
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mxa:MXAN_1683 LysR family transcriptional regulator.
  
     0.436
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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