STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2307PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: mms:mma_2176 2-acylglycerophosphoethanolamine acyltransferase. (246 aa)    
Predicted Functional Partners:
Snas_2202
PFAM: phosphatidate cytidylyltransferase; KEGG: dds:Ddes_0517 phosphatidate cytidylyltransferase.
    
 0.550
Snas_1233
PFAM: protein of unknown function DUF1023; KEGG: hypothetical protein.
  
     0.447
Snas_0558
PFAM: protein of unknown function DUF1023.
  
     0.420
Snas_1110
PFAM: protein of unknown function DUF1023; KEGG: bcm:Bcenmc03_5002 hemolysin-type calcium- binding region.
  
    0.407
Snas_2306
Hypothetical protein.
       0.407
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.