STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2495PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: azo:azo2864 hypothetical protein. (316 aa)    
Predicted Functional Partners:
Snas_2494
PFAM: protein of unknown function DUF58; KEGG: aav:Aave_1062 hypothetical protein.
 
     0.955
Snas_2493
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pol:Bpro_3891 ATPase associated with various cellular activities, AAA_3.
 
     0.933
Snas_2496
TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: prw:PsycPRwf_0457 3-oxoacyl-(acyl-carrier- protein) reductase.
       0.545
Snas_2056
Hypothetical protein.
  
     0.512
Snas_2497
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_6034 enoyl-(acyl carrier protein) reductase.
       0.499
Snas_6451
PFAM: protein of unknown function DUF1707; KEGG: ilo:IL0624 hypothetical protein.
  
     0.493
Snas_1210
PFAM: protein of unknown function DUF1707.
  
     0.462
Snas_6215
Hypothetical protein.
  
     0.437
Snas_1090
Hypothetical protein.
  
     0.435
Snas_1209
PFAM: protein of unknown function DUF1707.
  
     0.435
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.